Workflows

What is a Workflow?
10 Workflows visible to you, out of a total of 10
Work-in-progress

Analyse Bulk RNA-Seq data in preparation for downstream Pathways analysis with MINERVA

Type: Galaxy

Creators: Iacopo Cristoferi, Helena Rasche, Clinical Bioinformatics Unit, Pathology Department, Eramus Medical Center

Submitter: Helena Rasche

Work-in-progress

This portion of the workflow produces sets of feature Counts ready for analysis by limma/etc.

Type: Galaxy

Creators: Iacopo Cristoferi, Helena Rasche, Clinical Bioinformatics Unit, Pathology Department, Eramus Medical Center

Submitter: Helena Rasche

Work-in-progress

Analyse Bulk RNA-Seq data in preparation for downstream Pathways analysis with MINERVA

Type: Galaxy

Creators: Iacopo Cristoferi, Helena Rasche

Submitter: Helena Rasche

Stable

This workflow is created as part of a tutorial listed on GTN. The workflow shows the steps in human copy number variance detection using the Contrl_FREEC tool.

Type: Galaxy

Creators: khaled Jumah, Katarzyna Kamieniecka, Wolfgang Maier, Krzysztof Poterlowicz, poterlowicz-lab

Submitter: Khaled Jum'ah

DOI: 10.48546/workflowhub.workflow.676.1

Stable

Genome-wide alternative splicing analysis v.2

Stable

Abstract CWL Automatically generated from the Galaxy workflow file: Copy of Genome-wide alternative splicing analysis

Type: Galaxy

Creator: Cristóbal Gallardo

Submitter: Cristóbal Gallardo

Stable

This workflow correspond to the Genome-wide alternative splicing analysis training. It allows to analyze isoform switching by making use of IsoformSwitchAnalyzeR.

Stable

To discover causal mutations of inherited diseases it’s common practice to do a trio analysis. In a trio analysis DNA is sequenced of both the patient and parents. Using this method, it’s possible to identify multiple inheritance patterns. Some examples of these patterns are autosomal recessive, autosomal dominant, and de-novo variants, which are represented in the figure below. To elaborate, the most left tree shows an autosomal dominant inhertitance pattern where the offspring inherits a faulty ...

Stable

Workflow for the GTN training "Antibiotic resistance detection"

Type: Galaxy

Creators: Saskia Hiltemann, Willem de Koning

Submitter: Saskia Hiltemann

Stable

The tutorial for this workflow can be found on Galaxy Training Network

Type: Galaxy

Creator: Anne Fouilloux

Submitter: Bert Droesbeke

Powered by
(v.1.16.0-main)
Copyright © 2008 - 2024 The University of Manchester and HITS gGmbH